广州地区创伤弧菌分子生物学特征分析
作者:
作者单位:

1.广州市疾病预防控制中心微生物学检验部,广东 广州 510440;2.广州医科大学公共卫生研究院, 广东 广州 510440

作者简介:

张晶 女 副主任技师 研究方向为病原微生物学 E-mail:zhangjing9468@yahoo.com.cn
陈惠玲 女 主管技师 研究方向为病原微生物学 E-mail:chenhl020@126.com

通讯作者:

和鹏 男 副主任技师 研究方向为病原微生物学 E-mail:549478426@qq.com
侯水平 男 副主任技师 研究方向为病原微生物学 E-mail:gzcdc367@163.com

中图分类号:

R155

基金项目:

广东省医学科学技术研究基金项目(A2021040);广州市卫生健康科技一般引导项目(20221A010037);广州市医学重点学科(2021-2023-11);广州市重点实验室基础研究计划项目(202102100001)


The molecular biological characteristics of Vibrio vulnificus isolated in Guangzhou
Author:
Affiliation:

1.Department of Microbiology Test, Guangzhou Center for Disease Control and Prevention, Guangdong Guangzhou 510440, China;2.Institute of Public Health, Guangzhou Medical University, Guangdong Guangzhou 511436, China

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    摘要:

    目的 了解广州地区创伤弧菌的分子生物学特征。方法 对采集自广州地区的38株创伤弧菌进行全基因组测序,结合从NCBI公共数据库下载的50株序列数据,利用fineSTRUCTURE软件解析创伤弧菌的种群结构,并利用CARD、ResFinder和VFDB数据库对其毒力基因和耐药基因进行鉴定。结果 创伤弧菌分为4个系统发育谱系(L1~L4),广州地区分离株全部聚集于L1(占47%)和L2(占53%)谱系,ST分型主要为ST357、ST157、ST136、ST139、ST345、ST303等,呈现一定的区域聚集性。创伤弧菌多个基因组鉴定发现acrF、CRP、catB9、rpoC、ugd等11种耐药基因,并首次在创伤弧菌中发现与多黏菌素耐药相关的MCR基因。该物种还携带5类23种毒力基因,编码鞭毛蛋白、Ⅱ型分泌系统蛋白、荚膜多糖、RtxA毒素、铁超载等毒力相关基因。结论 广州地区创伤弧菌高度同源重组,并且携带多种耐药、毒力相关基因,应加强对其监测管理。

    Abstract:

    Objective To investigate the molecular and biological characteristics of Vibrio vulnificusV. vulnificus)isolated from Guangzhou.Methods Thirty-eight strains of V. vulnificus were collected from Guangzhou, and whole-genome sequences were obtained. The population structure of V. vulnificus was inferred by utilizing 50 publicly available genome sequences obtained from NCBI. FineSTRUCTURE software was employed for this analysis. Antibiotic resistance and virulence factors were identified using CARD, ResFinder, and VFDB databases.Results Four well-supported phylogenetic groups or lineages (L1-L4) were identified, and all genomes of the strains in Guangzhou were classified into L1 (47%) and L2 (53%). The predominant ST were ST357, ST157, ST136, ST139, ST345, ST303, and so on, which showed regional aggregation. Multiple genome identification of V. vulnificus revealed 11 drug resistance genes: acrFCRP catB9rpoC ugd, and others. MCR genes related to polymyxin resistance were identified in V. vulnificus for the first time. The species also carries 23 virulence genes in five classes encoding flagellin, type Ⅱ secretory system protein, capsular polysaccharide, RtxA toxin, iron overload, and other virulence-related genes.Conclusion Vibrio vulnificus in Guangzhou undergoes highly homologous recombination and carries a variety of antimicrobial resistance genes and virulence-related genes. Therefore, monitoring and management of Vibrio vulnificus should be strengthened.

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张晶,陈惠玲,和鹏,侯水平,白志军,陶霞,吴新伟.广州地区创伤弧菌分子生物学特征分析[J].中国食品卫生杂志,2023,35(12):1710-1714.

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  • 收稿日期:2022-11-25
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  • 在线发布日期: 2024-04-03
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